• 中文核心期刊
  • CSCD来源期刊
  • 中国科技核心期刊
  • CA、CABI、ZR收录期刊

留言板

尊敬的读者、作者、审稿人, 关于本刊的投稿、审稿、编辑和出版的任何问题, 您可以本页添加留言。我们将尽快给您答复。谢谢您的支持!

姓名
邮箱
手机号码
标题
留言内容
验证码

蚕豆VfNHX1基因克隆及初步功能验证

金文海 樊有存 李萍 范惠玲 侯万伟 滕长才 刘玉皎 武学霞

金文海,樊有存,李萍,等. 蚕豆VfNHX1基因克隆及初步功能验证 [J]. 福建农业学报,2024,39(6):1−11
引用本文: 金文海,樊有存,李萍,等. 蚕豆VfNHX1基因克隆及初步功能验证 [J]. 福建农业学报,2024,39(6):1−11
JIN W H, FAN Y C, LI P, et al. Cloning and Preliminary Functional Verification of VfNHX1 in Vicia faba L. [J]. Fujian Journal of Agricultural Sciences,2024,39(6):1−11
Citation: JIN W H, FAN Y C, LI P, et al. Cloning and Preliminary Functional Verification of VfNHX1 in Vicia faba L. [J]. Fujian Journal of Agricultural Sciences,2024,39(6):1−11

蚕豆VfNHX1基因克隆及初步功能验证

基金项目: 国家自然科学基金(42267008);国家现代农业产业技术体系项目(CARS-08)
详细信息
    作者简介:

    金文海(1996 —),男,硕士生,主要从事作物抗逆的生理和分子机制研究,E-mail:2669455772@qq.com

    通讯作者:

    武学霞(1988 —),女,博士,副教授,主要从事作物育种及作物抗逆分子机制研究,E-mail:xuexun111@163.com

  • 中图分类号: S643.6

Cloning and Preliminary Functional Verification of VfNHX1 in Vicia faba L.

  • 摘要:   目的  为探究蚕豆(Vicia faba L.)VfNHX1基因在响应盐胁迫过程中的作用。  方法  通过3′和5′RACE方法,从蚕豆中克隆了1个Na+/H+逆向转运蛋白编码基因VfNHX1,并对其进行了生物信息学分析、亚细胞定位、盐胁迫下的表达分析和初步功能验证。  结果  (1)该基因全长2255 bp,CDS编码区长1 629 bp,编码542个氨基酸;(2)生物信息学分析显示,该蛋白有10个跨膜区,不具有信号肽,是一个结构稳定的膜蛋白,且包含1个NHX 蛋白家族特有的Na-H Exchanger结构域;亚细胞定位分析显示VfNHX1定位在液泡膜上;(3)实时荧光定量PCR(qRT-PCR)分析显示,在NaCl处理后,叶片中VfNHX1表达量呈现先降低后升高,随即又下降的变化趋势,且在12 h时达最高值;根中VfNHX1表达量先降低后升高,在48 h时表达量显著升高(P<0.01);(4)酵母生长试验结果表明,VfNHX1 可以提高盐敏感酵母突变体AXT4K对高盐的耐受能力。  结论  VfNHX1基因能够响应盐胁迫,是蚕豆潜在抗盐功能基因。
  • 图  1  蚕豆中的RNA

    Figure  1.  RNA in V. faba L.

    1: RNA; M: Marker, DL2000.

    图  2  蚕豆中的cDNA

    M: Marker, DL2000;1:反转录后的cDNA;2、3:分别是RACE试剂盒反转录后的5′-cDNA、3′-cDNA。

    Figure  2.  cDNA in Vicia faba L.

    M: Marker, DL2000; 1: cDNA after reverse transcription; 2 and 3: 5'-cDNA and 3'-cDNA after reverse transcription of RACE kit, respectively.

    图  3  VfNHX1基因的中间片段、5′端和3′末端

    M: Marker, DL2000;NHX1中间: Intermediate fragment of VfNHX1 gene;

    Figure  3.  Intermediate fragment and 5′ and 3′ ends of VfNHX1

    图  4  VfNHX1蛋白进化树

    Figure  4.  Phylogenetic tree of VfNHX1 protein

    图  5  VfNHX1同源蛋白多序列比对

    以相似性 50% 为阈值,蓝色标注:相似性 ≥ 50%;粉色标注:相似性 ≥ 75%;黑色标注:相似性 ≥100%;蚕豆:Vicia faba;银豆:XP_028770753.1 (Prosopis alba);灰木豆:XP_054802326.1 (Prosopis cineraria);紫花苜蓿:AAR19085.1 (Medicago sativa);镰刀紫花苜蓿:ADB27460.1 (Medicago sativa subsp) ;花生: XP_016175144.1 (Arachis ipaensis);花生:ADK74832.1 (Arachis hypogaea);杜兰花:XP_015939959.1 (Arachis duranensis);木豆:XP_020209643.1 (Cajanus cajan);大豆:NP_001237166.2 (Glycine max);珠美海棠: ADB80440.1 (Malus zumi);甜樱桃:XP_021817479.1 (Prunus avium);桑树:AIL23819.1 (Morus notabilis);阿月浑子:XP_031267739.1 (Pistacia vera);白杨树:XP_034917931.1 (Populus alba);

    Figure  5.  Multiple sequence alignment of VfNHX1 homologous protein

    With threshold at 50% similarity, blue indicates ≥50%; pink, ≥75%; black, 100%.

    图  6  VfNHX1氨基酸种类及含量

    Figure  6.  Amino acid types and contents of VfNHX1

    图  7  VfNHX1的信号肽(A)、氨基酸序列(B)、保守结构域分析(C)

    Figure  7.  Signal peptide (A), amino acid sequence (B), and conserved domain (C) of VfNHX1

    图  8  VfNHX1蛋白结构预测

    A:蛋白二级结构预测;B:蛋白三级结构测。

    Figure  8.  Predicted structure of VfNHX1 protein

    A: Predicted protein secondary structure; B: predicted protein tertiary structure.

    图  9  VfNHX1的亚细胞定位

    Figure  9.  Subcellular localization of VfNHX1

    图  10  不同盐胁迫时间下VfNHX1在叶和根中的表达水平

    用LSD法分别对叶和根进行多重比较,标有不同大写字母表示组内差异极显著(P<0.01),标有不同小写字母表示组内差异显著(P<0.05),标有相同小写字母表示组内差异不显著(P>0.05)。

    Figure  10.  Relative expressions of VfNHX1 in leaves and roots under different durations of salt stress

    Multiple comparisons of leaves and roots were performed separately by LSD method; data with different uppercase letters indicate extremely significant differences at P<0.01; those with different lowercase letters indicate significant differences at P<0.05; those with same lowercase letters indicate not significantly different at P>0.05 within the group.

    图  11  盐胁迫下酵母生长

    A:稀释倍数。B:ns表示无显著差异(P>0.05),大写字母表示差异极显著(P<0.01),小写字母表示差异显著(P<0.05),相同小写字母表示差异不显著(P>0.05)。

    Figure  11.  Yeast growth under salt stress

    A: Dilution factor; B: ns indicates no significant difference at P>0.05; uppercase letters indicate extremely significant differences at P<0.01; lowercase letters indicate significant differences at P<0.05; same lowercase letters indicate not significantly different at P>0.05.

    表  1  VfNHX1基因克隆及荧光定量PCR引物

    Table  1.   Primers for VfNHX1 cloning and qRT-PCR

    引物名称
    Primername
    引物序列
    Primer sequence (5′→3′)
    用途
    Application
    NHX1-127F CTTGAGGAGAATCGGTGGATGAA 中间片段克隆
    NHX1-1270R GTGCTTGTGATCATGATTGCATTG Intermediate fragment cloning
    NHX1-5′-GSP1 CGTAAGCACTGAGCAGACCTGTCAAAACGC 5′第一轮引物
    5′ first round primers
    NHX1-5′-NGSP1 GGTGTCTCGTCTTGATTTAGCACCTGCAACG 5′第二轮引物
    5′ second round primers
    NHX1-3′-GSP2 CAAGCACTCTCCTTGGCGTTTTGACAGGTC 3′第一轮引物
    3′ first round primers
    NHX1-3′-NGSP2 CCTGTCGTTTGTTGCCGAGATCTTCATCTTCC 3′第二轮引物
    3′ second round primers
    UPM CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT 3′5′第一轮引物
    UPS CTAATACGACTCACTATAGGGC 3′5′ first round primers
    NHX1-438F TGATGCTACCTCAGTGGTGCTT 荧光定量PCR
    NHX1-622R AGTGCCTGCCAATGTAGAGC qRT-PCR
    ELF1A-F GTGAAGCCCGGTATGCTTGT 内参基因
    ELF1A-R CTTGAGATCCTTGACTGCAACATT Reference gene
    下载: 导出CSV

    表  2  生物信息学分析网站

    Table  2.   Bioinformatics analysis website

    用途 Function 网址 Website
    蛋白质信号肽分析
    Analysis of protein signal peptide
    https://services.healthtech.dtu.dk/services/signalp-6.0/
    蛋白质跨膜结构
    Protein transmembrane structure
    http://pfam-legacy.xfam.org/
    蛋白质亚细胞定位
    Protein subcellular localization
    http://www.csbio.sjtu.edu.cn/bioinf/plant-multi/
    保守结构域分析
    Conservative domain analysis
    https://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi
    蛋白质二级结构预测
    Protein secondary structure prediction
    https://npsaprabi.ibcp.fr/cgibin/npsa_automat.pl?page=npsa%20_sopma.html
    蛋白质三级结构预测
    Protein tertiary structure prediction
    https://swissmodel.expasy.org
    蛋白质理化性质
    Physicochemical properties of protein
    https://web.expasy.org/protparam/
    数据可视化
    Data visualization
    https://www.chiplot.online/
    下载: 导出CSV
  • [1] 罗达, 宋锋惠, 卢明艳, 等. 盐胁迫对平欧杂种榛根系生理生化特性的影响 [J]. 东北林业大学学报, 2024, 52(4):29−33,45. doi: 10.3969/j.issn.1000-5382.2024.04.005

    LUO D, SONG F H, LU M Y, et al. Effects of salt stress on the physiological and biochemical characteristics of ping’ou hybrid hazelnut root systems [J]. Journal of Northeast Forestry University, 2024, 52(4): 29−33,45. (in Chinese) doi: 10.3969/j.issn.1000-5382.2024.04.005
    [2] SHELKE D B, NIKALJE G C, CHAMBHARE M R, et al. Na+ and Cl− induce differential physiological, biochemical responses and metabolite modulations in vitro in contrasting salt-tolerant soybean genotypes [J]. 3 Biotech, 2019, 9(3): 91. doi: 10.1007/s13205-019-1599-6
    [3] 朱晨晨, 史昆, 何沁坤, 等. 混合盐碱胁迫对紫花苜蓿幼苗生理和基因表达的影响 [J]. 草地学报, 2024, 32(4):1044−1054.

    ZHU C C, SHI K, HE Q K, et al. Effects of mixed saline-alkali stress on physiology and gene expression of alfalfa seedlings [J]. Acta Agrestia Sinica, 2024, 32(4): 1044−1054. (in Chinese)
    [4] ZHANG H L, YU F F, XIE P, et al. A Gγ protein regulates alkaline sensitivity in crops [J]. Science, 2023, 379(6638): eade8416. doi: 10.1126/science.ade8416
    [5] KUMAR A, SINGH S, GAURAV A K, et al. Plant growth-promoting bacteria: Biological tools for the mitigation of salinity stress in plants [J]. Frontiers in Microbiology, 2020, 11: 1216. doi: 10.3389/fmicb.2020.01216
    [6] KARIM R, BOUCHRA B, FATIMA G, et al. Plant NHX antiporters: From function to biotechnological application, with case study [J]. Current Protein & Peptide Science, 2021, 22(1): 60−73.
    [7] 万玺宏, 张会龙, 朱建峰, 等. 液泡膜转运蛋白在植物耐盐性调控中的作用 [J]. 植物生理学报, 2024, 60(2):295−310.

    WAN X H, ZHANG H L, ZHU J F, et al. The role of tonoplast transporters in the regulation of salt tolerance in plants [J]. Plant Physiology Journal, 2024, 60(2): 295−310. (in Chinese)
    [8] 银芳柳, 毛晓菲, 曾幼玲. 盐生植物盐爪爪液泡膜钠氢反向运输载体基因(KfNHX1)遗传转化拟南芥的耐盐性鉴定 [J]. 新疆农业科学, 2021, 58(3):565−572.

    YIN F L, MAO X F, ZENG Y L. Salt-tolerant identification of genetic transformation in Arabidopsis with the KfNHX1 gene from the halophyte Kalidium foliatum [J]. Xinjiang Agricultural Sciences, 2021, 58(3): 565−572. (in Chinese)
    [9] 李晓薇, 郭嘉, 王鑫, 等. 羊草液泡膜Na+/H+逆向转运蛋白基因LcNHX1的克隆及功能分析 [J]. 中国草地学报, 2017, 39(5):1−9.

    LI X W, GUO J, WANG X, et al. Cloning and functional analysis of a vacuolar Na+/H+ antiporter gene LcNHX1 from Leymus chinensis [J]. Chinese Journal of Grassland, 2017, 39(5): 1−9. (in Chinese)
    [10] HUANG Y, ZHANG X X, LI Y H, et al. Overexpression of the Suaeda salsa SsNHX1 gene confers enhanced salt and drought tolerance to transgenic Zea mays [J]. Journal of Integrative Agriculture, 2018, 17(12): 2612−2623. doi: 10.1016/S2095-3119(18)61998-7
    [11] BIMURZAYEV N, SARI H, KURUNC A, et al. Effects of different salt sources and salinity levels on emergence and seedling growth of faba bean genotypes [J]. Scientific Reports, 2021, 11: 18198. doi: 10.1038/s41598-021-97810-6
    [12] NASRALLAH A K, ATIA M A M, ABD EL-MAKSOUD R M, et al. Salt priming as a smart approach to mitigate salt stress in faba bean (Vicia faba L. ) [J]. Plants, 2022, 11(12): 1610. doi: 10.3390/plants11121610
    [13] ÁLVAREZ-IGLESIAS L, PUIG C G, REVILLA P, et al. Faba bean as green manure for field weed control in maize [J]. Weed Research, 2018, 58(6): 437−449. doi: 10.1111/wre.12335
    [14] OUZOUNIDOU G, ILIAS I F, GIANNAKOULA A, et al. Effect of water stress and NaCl triggered changes on yield, physiology, biochemistry of broad bean (Vicia faba) plants and on quality of harvested pods [J]. Biologia, 2014, 69(8): 1010−1017. doi: 10.2478/s11756-014-0397-1
    [15] 陈江飞, 余津铭, 杨建坤, 等. 茶树Na+/H+逆向转运蛋白基因CsNHX1CsNHX2的克隆及表达分析 [J]. 茶叶科学, 2018, 38(6):559−568. doi: 10.3969/j.issn.1000-369X.2018.06.002

    CHEN J F, YU J M, YANG J K, et al. Cloning and expression analysis of Na+/H+Antiporter gene CsNHX1 and CsNHX2 in tea plant(Camellia sinensis) [J]. Journal of Tea Science, 2018, 38(6): 559−568. (in Chinese) doi: 10.3969/j.issn.1000-369X.2018.06.002
    [16] 唐欣, 王瑞辉, 杨秀艳, 等. 唐古特白刺液泡膜Na+/H+逆向运输蛋白基因NtNHX1的克隆与表达分析 [J]. 林业科学, 2014, 50(3):38−44.

    TANG X, WANG R H, YANG X Y, et al. Isolation and expression analysis of a vacuolar membrane Na+/H+ antiporter gene NtNHX1 from Nitraria tangutorum [J]. Scientia Silvae Sinicae, 2014, 50(3): 38−44. (in Chinese)
    [17] 陈心仪, 吴成英, 贺海皓, 等. 滇水金凤4CL基因的克隆及表达分析 [J]. 福建农业学报, 2024, 39(1):40−48.

    CHEN X Y, WU C Y, HE H H, et al. Cloning and expression of 4CLs in Impatiens uliginosa [J]. Fujian Journal of Agricultural Sciences, 2024, 39(1): 40−48. (in Chinese)
    [18] 姚娜, 云岚, 艾芊, 等. 冬箭筈豌豆耐盐基因NHX1克隆及表达分析[J]. 草地学报, 2024, 32(5): 1401-1409

    YAO N, YUN L, AI Q, et al. Cloning and expression analysis of salt-tolerant gene NHX1 in Vicia villosa Roth[J]. Acta Agrestia Sinica, 2024, 32(5): 1401-1409. (in Chinese)
    [19] 李霞, 孔丹宇, 刘传鑫, 等. 滨豇豆VmNHX基因克隆与表达分析 [J]. 分子植物育种, 2024, 22(2):402−413.

    LI X, KONG D Y, LIU C X, et al. Cloning and expression analysis of VmNHX gene in Vigna marina [J]. Molecular Plant Breeding, 2024, 22(2): 402−413. (in Chinese)
    [20] 董禄禄, 秦晓春, 党振华. 长叶红砂液泡膜Na+/H+逆向转运蛋白基因的克隆及表达特性 [J]. 西北植物学报, 2015, 35(11):2164−2170. doi: 10.7606/j.issn.1000-4025.2015.11.2164

    DONG L L, QIN X C, DANG Z H. Isolation and expression of vacuolar membrane Na+/H+ antiporter gene in reaumuriatrigyna [J]. Acta Botanica Boreali-Occidentalia Sinica, 2015, 35(11): 2164−2170. (in Chinese) doi: 10.7606/j.issn.1000-4025.2015.11.2164
    [21] 张永利, 孟晓烨, 孙婷梅, 等. 珠美海棠Mz 2NHX1基因的克隆和序列分析 [J]. 江苏农业科学, 2015, 43(9):20−25.

    ZHANG Y L, MENG X Y, SUN T M, et al. Cloning and sequence analysis of Mz 2NHX1 gene from Malus jumeiensis [J]. Jiangsu Agricultural Sciences, 2015, 43(9): 20−25. (in Chinese)
    [22] 邱全胜. 拟南芥NHX5和NHX6: 离子平衡与蛋白质运输 [J]. 中国科学: 生命科学, 2017, 47(8):839−846. doi: 10.1360/N052016-00351

    QIU Q S. Arabidopsis NHX5 and NHX6: Ion homeostasis and protein transport [J]. Scientia Sinica (Vitae), 2017, 47(8): 839−846. (in Chinese) doi: 10.1360/N052016-00351
    [23] 李源, 蔡勤安, 马瑞, 等. 植物Na+/H+逆向转运蛋白研究进展 [J]. 山东农业科学, 2022, 54(10):143−152.

    LI Y, CAI Q A, MA R, et al. Research progress of plant Na+/H+ antiporter [J]. Shandong Agricultural Sciences, 2022, 54(10): 143−152. (in Chinese)
    [24] 边晨凯, 龙定沛, 刘雪琴, 等. 桑树Na+/H+逆向转运蛋白基因(MnNHX1)的克隆与耐盐力表达 [J]. 林业科学, 2015, 51(8):16−25.

    BIAN C K, LONG D P, LIU X Q, et al. Cloning and expression to salt stress of Na+/H+ antiporter gene(MnNHX1) in mulberry tree [J]. Scientia Silvae Sinicae, 2015, 51(8): 16−25. (in Chinese)
    [25] 许浩宇, 赵颖, 阮倩, 等. 不同混合盐碱下藜麦幼苗的抗性研究 [J]. 草业学报, 2023, 32(1):122−130. doi: 10.11686/cyxb2021500

    XU H Y, ZHAO Y, RUAN Q, et al. Resistance of quinoa seedlings under different salt-alkali stress levels [J]. Acta Prataculturae Sinica, 2023, 32(1): 122−130. (in Chinese) doi: 10.11686/cyxb2021500
    [26] 李宁宁, 孙亚卿, 李国龙. 高糖甜菜BvNHX1基因的克隆及表达特性分析 [J]. 分子植物育种, 2021, 19(16):5250−5257.

    LI N N, SUN Y Q, LI G L. Cloning and expression analysis of BvNHX1 from beta vulgaris with high sucrose [J]. Molecular Plant Breeding, 2021, 19(16): 5250−5257. (in Chinese)
    [27] 高玉龙, 宋中邦, 李梅云, 等. 烟草NtNHX1-3基因的克隆及表达特性 [J]. 西北植物学报, 2018, 38(12):2201−2206. doi: 10.7606/j.issn.1000-4025.2018.12.2201

    GAO Y L, SONG Z B, LI M Y, et al. Cloning and expression characteristics of tobacco NtNHX1-3 Gene [J]. Acta Botanica Boreali-Occidentalia Sinica, 2018, 38(12): 2201−2206. (in Chinese) doi: 10.7606/j.issn.1000-4025.2018.12.2201
    [28] 李玥, 肖如雪, 芮蕊, 等. 筇竹Na+/H+逆向转运蛋白基因克隆与表达分析 [J]. 分子植物育种, 2021, 19(10):3235−3242.

    LI Y, XIAO R X, RUI R, et al. Cloning and expression analysis on QtNHX1 gene from Qiongzhuea tumidinoda [J]. Molecular Plant Breeding, 2021, 19(10): 3235−3242. (in Chinese)
    [29] 喻珊, 胡艳平, 丛心黎, 等. 海马齿Na+/H+逆转运蛋白基因SpNHX1的克隆及表达模式 [J]. 热带生物学报, 2015, 6(2):127−133. doi: 10.3969/j.issn.1674-7054.2015.02.004

    YU S, HU Y P, CONG X L, et al. Isolation and expression analysis of Na+/H+ antiporter gene SpNHX1 from Sesuvium portulacastrumand L. [J]. Journal of Tropical Biology, 2015, 6(2): 127−133. (in Chinese) doi: 10.3969/j.issn.1674-7054.2015.02.004
    [30] 王立光, 陈军, 叶春雷, 等. 酿酒酵母BJ3505 NHX1基因突变株的构建及功能验证 [J]. 生物技术通报, 2018, 34(12):152−158.

    WANG L G, CHEN J, YE C L, et al. Mutant construction and functional validation of NHX1 in Saccharomyces cerevisiae BJ3505 [J]. Biotechnology Bulletin, 2018, 34(12): 152−158. (in Chinese)
    [31] 刘威, 李慧, 蔺经, 等. 杜梨PbNHX1基因的克隆、表达分析及功能验证 [J]. 果树学报, 2018, 35(2):137−146.

    LIU W, LI H, LIN J, et al. Cloning, expression and functional analysis of PbNHX1 gene in Pyrus betulaefolia [J]. Journal of Fruit Science, 2018, 35(2): 137−146. (in Chinese)
    [32] 赵云霞, 郭丹丽, 魏艳玲, 等. 新疆无苞芥Na+/H+逆向转运蛋白基因OpNHX1的克隆、表达分析与功能验证 [J]. 生物技术通报, 2014, (7):74−80.

    ZHAO Y X, GUO D L, WEI Y L, et al. Cloning, expressing and functional analysis of Na+/H+ antiporter gene OpNHX1 from Olimarabidopsis pumila in Xinjiang [J]. Biotechnology Bulletin, 2014(7): 74−80. (in Chinese)
  • 加载中
图(11) / 表(2)
计量
  • 文章访问数:  151
  • HTML全文浏览量:  86
  • PDF下载量:  7
  • 被引次数: 0
出版历程
  • 收稿日期:  2024-01-03
  • 录用日期:  2024-06-02
  • 修回日期:  2024-05-28
  • 网络出版日期:  2024-07-10

目录

    /

    返回文章
    返回