• 中文核心期刊
  • CSCD来源期刊
  • 中国科技核心期刊
  • CA、CABI、ZR收录期刊

基于蛋白质相互作用网络的茶树抗假眼小绿叶蝉研究

Resistance of Tea Plants to Empoasca vitis Gothe Invasion Analyzed by PPIN

  • 摘要:
      目的  细胞生长的每个阶段都离不开蛋白质相互作用,研究假眼小绿叶蝉侵染茶叶后差异基因参与的蛋白质相互作用对解析抗虫分子机理具有指导意义。
      方法  对有无受假眼小绿叶蝉侵害的都匀毛尖茶树鸟王种进行转录组测序,基于同源比对算法构建0 h与12 h、0 h与24 h的差异基因蛋白质相互作用网络。
      结果  0 h与12 h的差异基因共有212个互作,0 h与24 h的差异基因共有3 551个互作,合并网络后得到3 605个互作,并对网络进行拓扑属性分析,发现网络中蛋白质的度符合幂律分布。通过网络可以进行蛋白质的功能预测,并且对网络进行GO和KEGG分析发现差异基因的蛋白互作主要参与植物病原体互作,植物激素信号转导,DNA碱基切除修复、核酸切除修复、错配修复,亚麻酸和亚油酸代谢等生物过程,并且侵染24 h比侵染12 h需要启动更多的互作来抵御假眼小绿叶蝉的侵染。
      结论  茶叶主要通过三个差异基因启动相应的互作来抵抗假眼小绿叶蝉的侵害,继续被侵害时将启动更多的互作,并通过产生相关次级代谢产物来抵御虫害。研究结果为探究鸟王种受假眼小绿叶蝉取食前后茶树抵御假眼小绿叶蝉侵染的代谢机理提供参考,为都匀毛尖病虫害防治、后续良种选育和引种奠定基础。

     

    Abstract:
      Objective  The protein-protein interaction networks (PPINs) was applied to decipher the protective mechanism of tea plants in resisting the invasion by insects.
      Method  RNA-seq was used to determine if a Camellia sinensis cv. Niaowang plant was infested by Empoasca vitis Gothe. PPINs of differential expression genes (DEGs) between 0 h and 12 h as well as 0 h and 24 h after the infestation were constructed based on Interolog.
      Result  There were 212 PPIs between 0 h and 12 h, 3 551 PPIs between 0 h and 24 h, and 3 605 PPIs in the merged network. The topological properties of the PPINs showed the degree of the protein distribution following the power-law model, and hence, their functions predictable. It was found that DEGs mainly partook in the plant-pathogen interactions, plant hormone signal transduction, DNA base excision repair, nucleotide excision repair, mismatch repair, linolenic acid and alpha-linoleic acid metabolism, and other biological processes through GO and KEGG analysis. Furthermore, the tea leaves that were infected for 24 h would require greater amounts of PPIs than those affected for 12 h to develop the defense mechanism to ward off the ill-effect brought by Empoasca vitis Gothe.
      Conclusion  Tea plants mainly resist the invasion of Empoasca Vitis through the three differential genes to promote the corresponding interaction, and when tea plants continue to be invaded, more interactions will be initiated, or various secondary metabolites will be produced to resist pests. To resist the invasion of Empoasca Vitis, tea plant mainly promoted the PPIs of three differential genes. When invasion continuing, more interactions would be initiated, and various secondary metabolites would be produced to resist pests.

     

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