• 中文核心期刊
  • CSCD来源期刊
  • 中国科技核心期刊
  • CA、CABI、ZR收录期刊

豆伞滑刃线虫类毒液过敏原蛋白基因Bd-VAP-1的克隆及原位杂交分析

Cloning and Organ-localization by In Situ Hybridization of Bd-VAP-1 in Bursaphelenchus doui

  • 摘要:
    目的 克隆豆伞滑刃线虫类毒液过敏原蛋白(venom allergen-like protein, VAP)基因Bd-VAP-1,并进行表达特性分析,为深入研究Bd-VAP-1基因在豆伞滑刃线虫与寄主互作过程中的作用提供参考。
    方法 以包括食道腺、分泌孔和头感器在内的豆伞滑刃线虫体前端材料作为测验组,以包括肠道在内的豆伞滑刃线虫体后端材料作为驱动组,选择固相消减杂交策略构建豆伞滑刃线虫体前端特异表达cDNA文库。通过反向Northern杂交鉴定和测序获得差异表达基因序列,结合cDNA末端快速克隆(rapid amplification of cDNA ends, RACE)技术获得目的基因全长序列,并利用生物信息学方法进行序列特征分析;最后利用原位杂交技术进行基因表达定位。
    结果 成功构建1个豆伞滑刃线虫体前端特异表达cDNA文库,并利用反向Northern印迹杂交、测序和RACE等技术,从豆伞滑刃线虫中分离鉴定出1个类毒液过敏原蛋白(VAP)基因,该基因命名为Bd-VAP-1,GenBank登录号为GU451047。Bd-VAP-1基因开放阅读框全长为644 bp,包括2个外显子和1个内含子;编码区全长为609 bp,编码202个氨基酸。预测蛋白质的相对分子量为22.32 kD,理论等电点为4.86,与松材线虫和拟松材线虫VAP同源蛋白的序列一致性较高,含有1个典型且保守的CAP结构域,存在信号肽但无跨膜结构域,属于分泌型蛋白。原位杂交结果表明,Bd-VAP-1基因在豆伞滑刃线虫体前端的食道腺特异表达。
    结论 成功克隆了豆伞滑刃线虫Bd-VAP-1基因,初步推测其编码蛋白在线虫食道腺合成,并在线虫与宿主互作过程中分泌到体外发挥作用。

     

    Abstract:
    Objective A venom allergen-like protein (VAP) gene was cloned from Bursaphelenchus doui with its expressions in organs and function in the nematode-host interaction determined.
    Method A specific cDNA library on B. doui was constructed by solid-phase hybridization using cDNA from the anterior end as the tester and the posterior end of nematode as the driver. It was subsequently scrutinized by the reverse-northern blotting to obtain the sequence of positive clones. The full-length cDNA of Bd-VAP-1 gene was cloned using the rapid amplification of cDNA ends (RACE) technology, nucleotide and amino acid sequences analyzed using bioinformatics methods, and gene expression in organs localized by in situ hybridization.
    Result A specific cDNA library of the anterior end of B. doui was successfully constructed. The full-length cDNA encoding a putative Bd-VAP-1 was identified by the reverse-northern blotting, sequencing, and RACE technologies. The open reading frame of Bd-VAP-1 was 644 bp in length and consisted of two extrons and one intron. The coding region, 609 bp in length, encoded a 202-amino acid protein with an average molecular weight of 22.32 kD and theoretical isoelectric point of 4.86. The Bd-VAP-1 protein was highly similar in sequence to the MIF homologous proteins of B. xylophilus and B. mucronatus. A secretory protein, it contained a typical CAP conservative domain and a signal peptide without a transmembrane structure. The gene expressed predominantly in the esophagus glands of B. doui as shown by the in situ hybridization.
    Conclusion Bd-VAP-1 was successfully cloned and speculated to have its coding protein synthesized in the esophageal gland of B. doui and excreted to affect the host.

     

/

返回文章
返回