• 中文核心期刊
  • CSCD来源期刊
  • 中国科技核心期刊
  • CA、CABI、ZR收录期刊

猪流行性腹泻病毒荧光RT-RAA检测方法的建立及初步应用

Establishment and preliminary application of fluorescent RT-RAA diagnostic method for porcine epidemic diarrhea virus

  • 摘要:
      目的  建立一种快捷、灵敏、简便检测猪流行性腹泻病毒(porcine epidemic diarrhea virus, PEDV)的RT-RAA检测方法,以提高猪流行性腹泻病毒临床检测效率。
      方法  针对PEDV S基因片段保守区设计引物和探针,构建标准质粒PEDV-S,通过特异性、敏感性、重复性测定及条件优化,建立检测PEDV重组酶介导链置换核酸扩增荧光法(RT-RAA)。
      结果  在42 ℃恒温作用20 min的条件下,建立的检测方法对检测猪传染性胃肠炎病毒(porcine transmissible gastroenteritis virus, TGEV)、猪瘟病毒(classical swine fever virus, CSFV)、伪狂犬病病毒(porcine pseudorabies virus, PRV)、猪繁殖与呼吸综合征病毒(porcine reproductive and respiratory syndrome virus, PRRSV)和猪轮状病毒(porcine rotavirus, PoRV)等猪源病毒均为阴性,猪流行性腹泻病毒(PEDV)为阳性;最低检出限为4.43×102拷贝·μL−1的标准质粒;重复性结果显示,相同浓度标准质粒的差异性很小;利用建立的RT-RAA方法检测40份猪病毒样本,阳性率均为7.5%(3/40),与实时荧光定量PCR检测结果相同。
      结论  本研究建立的PEDV RT-RAA检测方法具有快速简便、耗时短、特异性高、灵敏度强和重复性好等特点,适用于对PEDV的快速诊断。

     

    Abstract:
      Objective  To establish a quick, simple, sensitive detection of porcine epidemic diarrhea virus (PEDV) the RT- RAA detection method, to improve the efficiency of porcine epidemic diarrhea virus clinical detection.
      Method  Primers and probes were designed for the conserved region of PEDVS gene fragment, and a standard plasmid PEDV-S was constructed. Through specificity, sensitivity, repeatability and condition optimization, a recombinant enzyme-mediated chain replacement nucleic acid amplification fluorescence assay (RT-RAA) for detection of PEDV was established.
      Result  Under the condition of constant temperature at 42 ℃ for 20 min,The established assay is effective for the detection of porcine transmissible gastroenteritis virus (TGEV), classical swine fever virus (CSFV), porcine pseudorabies virus (PRV), porcine reproductive and respiratory syndrome virus (PRRSV), porcine rotavirus (PoRV) and other porcine viruses were negative, porcine epidemic diarrhea virus (PEDV) was positive.The minimum detection limit was 4.43× 102 copies·μL−1 standard plasmid.The reproducibility results showed that there was little difference between the standard plasmids with the same concentration.The positive rate of 40 swine virus samples was 7.5% (3/40) by RT-RAA method, which was the same as that of real-time fluorescence quantitative PCR.
      Conclusion  The RT-RAA detection method for PEDV established in this study is suitable for the rapid diagnosis of PEDV due to its rapid and simple detection, short time-consuming, high specificity, strong sensitivity and good reproducibility.

     

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